Summarise Deep Mutational Scans

# S3 method for deep_mutational_scan
summary(object, ...)

# S3 method for deep_mutational_scan_summary
format(x, ...)

# S3 method for deep_mutational_scan_summary
print(x, ...)

Arguments

object, x

A deep_mutational_scan object.

...

Additional arguments

Value

deep_mutational_scan_summary object containing:

studies

The number of studies scanned

annotated

Logical showing whether the dataset has been annotated with deep mutational landscape data

imputed

Named vector summarising the number of imputed scores

multi_study

Logical showing whether the dataset contains multiple studies

positions

Number of positions with data

er

Named vector containing summary statistics to ER scores

clusters

Named vector summarising cluster annotations

Functions

  • format.deep_mutational_scan_summary: S3 format method

  • print.deep_mutational_scan_summary: S3 print method