Identify positions outside the mutational landscape

Source: R/check.R

Find positions that lie outside the studied deep mutational landscape.

landscape_outliers(x, cutoff = 0.25)

Arguments

x

Annotated deep_mutational_scan.
cutoff

Minimum distance from any studied position to be labelled an outlier.

Value

integer vector containing the rows of outlying positions

Examples

x <- annotate(deep_scans$p53)
landscape_outliers(x)

#> [1] 174